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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954716.1_cds_XP_016493489.1_83596
CDS Infomation

[gene=LOC107812833] [db_xref=GeneID:107812833] [protein=lysine--tRNA ligase-like] [protein_id=XP_016493489.1] [location=join(90732..90899,91268..91439,91507..91600,92234..92319,92977..93086,93155..93217,93342..93467,93568..93850,93961..94057,94137..94293,94926..95069,95161..95229,95533..95676,96268..96323,97442..97518,97725..97762)] [gbkey=CDS]
Sequence

ATGGAGAACCCAGAAAACAAGGCGAAATCTGAAAACAAGGGGAAGTCTGAAAAGAAGGGG
AAGTCTGAAAACAAGGGGAAATCTGAAAACAAGGGGAAATCTGAAAACAAGCCAAGCACT
CAGTCTCAAAAGCATGCTGCAGCCGGTGATGAGGACATGGATCCAACGCAATACTTTGAA
AATAGGCTGAAAGCACTCGAGGCTGAGAAGGCAACAGGGGAGAATCCTTACCCACACAAA
TTCGAAGTCGAATTGGAATTGTTGTCTATCCCTGATTATGTGAAGAAATATGGAGTTTTA
GAAAGTGGAGCTCATTCCGCTGATGAAGTGTCGTTGGCTGGAAGGATAATGAATAAACGT
GCCTCTTCTGCAAAGCTGCTTTTCTATGATTTACATGGTGGAGGTGCCAAAGTTCAAGTT
ATGGCAAGTGCAAGGGATTCTGAATTGGAGGACGACGACTTTATTAAATTTCATTCTGGT
GTGAAACGTGGAGATATTGTCGGAATCACTGGGTGTCCAGGAAAGAGTAAAAGGGGAGAG
CTGAGTATTTTTCCCAAATCATTCAAAGTGTTATCTCATTGTCTTCATATGATGCCACGG
CAGAAAGGTGCCCAGACGGATACAACTAAGAAAATTGAAGCATGGGTCCCGGGAAGTGGC
CGAAATCCAGATACATATGTTTTGAAAGATCAGGAAACACGATATAGACAGCGTTATTTG
GATTTGATGCTGAACTTAGAGATTCGGTACATATTTAAGACCCGAGCAAAGATCATAACT
TATATTCGAAGCTTTCTTGATAATCGTGACTTCTTAGAGGTAGAGACCCCCATGATGAAC
ATGATTGCTGGTGGAGCAGCTGCACGCCCATTTGTGACCCACCACAATGATTTGAATATG
AGGCTTTTCATGCGTATTGCTCCTGAACTATATCTTAAAGAGCTGGTTGTTGGTGGATTG
GAACGTGTCTATGAGATTGGGAAACAATTCAGAAATGAGGGAATTGACTTGACACACAAT
CCTGAATTCACCACTTGCGAGTTTTATATGGCATATGCGGATTACAATGACTTGATGGAT
CTAACTGAAAAAATGCTTAGTGGGATGGTGAAGGAACTTACAGGTGGCTATATAATCAAG
TATCATGCAAAGGGGCTGGAGAACGACCCCATTGAGATTGACTTCACTCCTCCCTTCAGA
CGGATTGATATGGTAGAGGAATTGGAGAAGGCCGCAAACTTGAATATACCCAAGGATCTC
TCAAGTACTGAAGCTAACAAATATCTCATAGATGCTTGTGCAAAGCTTGAGATCAAATGT
CCTCCACCTCAAACAACAGCTAGATTACTTGATAAACTTGTAGGGCACTTTCTGGAGGAG
ACATGTGTTAACCCTACTTTTATCATCAACCATCCCGAGATAATGAGTCCTTTGGCAAAG
TGGCACAGATCTAAACCAGGCCTGACAGAACGTTTTGAATTGTTCATTAACAAGCATGAA
CTTTGCAATGCATACACTGAATTGAATGACCCTGTTGTCCAACGCCAGCGTTTTGCTGAT
CAACTCAAGGACCGACAATCAGGTGACGATGAAGCTATGGCACTGGATGAGAACTTTTGT
ACAGCTCTTGAATATGGATTACCTCCTACTGGTGGTTGGGGATTGGGTATTGACCGACTT
GCGATGTTGTTAACAGATTCACAAAACATCAAGGAAGTTCTACTCTTTCCAGCCATGAAA
CCACAGGATGAGCCACCTTCCAAGGAAAGCAATAAAAAGCCTCAGGAGGAATCTGCCAAG
CCTCACGACGGACAAGCAAAACCTCAGGGTGGGCCTACAACACAAGATGTGGAAAAGCAG
GTCTCGCAGCTCACAGTGAAGTGA

Peptide Sequence

PEP ID

XP_016493489.1
PEP Infomation

PREDICTED: lysine--tRNA ligase-like [Nicotiana tabacum]
Sequence

MENPENKAKSENKGKSEKKGKSENKGKSENKGKSENKPSTQSQKHAAAGDEDMDPTQYFE
NRLKALEAEKATGENPYPHKFEVELELLSIPDYVKKYGVLESGAHSADEVSLAGRIMNKR
ASSAKLLFYDLHGGGAKVQVMASARDSELEDDDFIKFHSGVKRGDIVGITGCPGKSKRGE
LSIFPKSFKVLSHCLHMMPRQKGAQTDTTKKIEAWVPGSGRNPDTYVLKDQETRYRQRYL
DLMLNLEIRYIFKTRAKIITYIRSFLDNRDFLEVETPMMNMIAGGAAARPFVTHHNDLNM
RLFMRIAPELYLKELVVGGLERVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYADYNDLMD
LTEKMLSGMVKELTGGYIIKYHAKGLENDPIEIDFTPPFRRIDMVEELEKAANLNIPKDL
SSTEANKYLIDACAKLEIKCPPPQTTARLLDKLVGHFLEETCVNPTFIINHPEIMSPLAK
WHRSKPGLTERFELFINKHELCNAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDENFC
TALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFPAMKPQDEPPSKESNKKPQEESAK
PHDGQAKPQGGPTTQDVEKQVSQLTVK

Transcript Sequence

Gene sequence data has not been registered.